C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-serine-threonine phosphatase interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559750 PSTPIP1-006 ENSG00000140368 9606 + 15:76995172-77031761 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartKidneyLungOvaryTestisENST00000559750
Transcript ID Adrenal Heart Kidney Lung Ovary Testis
ENST00000559750 2.116±0.00 0.243±0.00 0.285±0.04 1.650±0.00 0.214±0.00 0.239±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000246 CIL_000246_0001 CGP 15:76931619-77037332
CIL_0003NQ CIL_0003NQ_0002 CGP 15:76993359-77083984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000147360 Pstpip1-002 retained_intron Mus_musculus 0 649
ENSMUST00000138646 Pstpip1-003 retained_intron Mus_musculus 0 649
ENSMUST00000059206 Pstpip1-001 protein_coding Mus_musculus 0 649
ENSMUST00000144638 Pstpip1-004 processed_transcript Mus_musculus 0 422
ENSMUST00000132800 Pstpip1-006 retained_intron Mus_musculus 0 331

Loading