C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 61
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559848 WDR61-010 ENSG00000140395 9606 - 15:78288339-78299597 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLungMuscleOvaryENST00000559848
Transcript ID Bladder Brain Breast Lung Muscle Ovary
ENST00000559848 3.546±0.00 5.500±0.00 5.118±0.00 4.062±0.00 0.932±0.00 1.814±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TL CIL_0003TL_0001 CGP 15:78167468-78282196
CIL_0003TI CIL_0003TI_0001 CGP 15:78264086-78299794
CIL_00050O CIL_00050O_0002 CGP 15:78277835-78348230

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051822 Wdr61-001 protein_coding Mus_musculus 0 867
ENSMUST00000121204 Wdr61-002 protein_coding Mus_musculus 0 859
ENSMUST00000118771 Wdr61-004 protein_coding Mus_musculus 0 859
ENSMUST00000130368 Wdr61-003 protein_coding Mus_musculus 0 841
ENSMUST00000127451 Wdr61-005 protein_coding Mus_musculus 0 832
ENSMUST00000148494 Wdr61-006 retained_intron Mus_musculus 0.00000000004 73

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