C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: APH1B gamma secretase subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560353 APH1B-005 ENSG00000138613 9606 + 15:63277618-63305801 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverLungMuscleTestisENST00000560353
Transcript ID Bladder Liver Lung Muscle Testis
ENST00000560353 1.694±0.00 3.774±0.00 2.474±0.00 1.947±0.00 16.975±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094O CIL_00094O_0001 VISTA 15:62748846-63351985
CIL_00098V CIL_00098V_0001 VISTA 15:62790346-63394142

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0016485 IEA protein processing
GO:0043085 IEA positive regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034934 Aph1b-001 protein_coding Mus_musculus 0 566
ENSMUST00000168309 Aph1b-002 nonsense_mediated_decay Mus_musculus 0 564
ENSMUST00000169282 Aph1c-001 protein_coding Mus_musculus 0 521
ENSMUST00000057261 Aph1c-002 protein_coding Mus_musculus 0 407
ENSMUST00000113730 Aph1b-003 protein_coding Mus_musculus 0 202

Loading