C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Meis homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560702 MEIS2-016 ENSG00000134138 9606 - 15:36891032-36898339 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverLungOvaryENST00000560702
Transcript ID Bladder Breast Colon Heart Liver Lung Ovary
ENST00000560702 1.230±0.00 0.681±0.18 1.098±0.00 0.851±0.00 4.055±0.00 1.389±0.00 1.411±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MM CIL_0007MM_0001 UCNEbase 15:35253766-37880700
CIL_00088L CIL_00088L_0001 VISTA 15:36372618-36973897
CIL_0008GX CIL_0008GX_0001 VISTA 15:36373931-36975330
CIL_00084J CIL_00084J_0001 VISTA 15:36391617-36991995
CIL_0006QS CIL_0006QS_0001 CGP 15:36579611-37101299
CIL_00087U CIL_00087U_0001 VISTA 15:36595901-37198492
CIL_0008KD CIL_0008KD_0001 VISTA 15:36599207-37200420
CIL_0008O9 CIL_0008O9_0001 VISTA 15:36624792-37227400
CIL_0008M1 CIL_0008M1_0001 VISTA 15:36648604-37250297
CIL_00096Q CIL_00096Q_0001 VISTA 15:36695888-37296972
CIL_0009D1 CIL_0009D1_0001 VISTA 15:36755403-37357754
CIL_00086F CIL_00086F_0001 VISTA 15:36779528-37380936
CIL_0006QR CIL_0006QR_0001 CGP 15:36889204-37967724

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102538 Meis2-012 protein_coding Mus_musculus 0 2326
ENSMUST00000028639 Meis2-011 protein_coding Mus_musculus 0 2246
ENSMUST00000110908 Meis2-013 protein_coding Mus_musculus 0 2082
ENSMUST00000110907 Meis2-001 protein_coding Mus_musculus 0 2082
ENSMUST00000110906 Meis2-006 protein_coding Mus_musculus 0 1967
ENSMUST00000074285 Meis2-014 protein_coding Mus_musculus 0 1724
ENSMUST00000120995 Meis2-003 processed_transcript Mus_musculus 0 977
ENSMUST00000189640 Meis2-020 retained_intron Mus_musculus 0 686
ENSMUST00000177493 Meis2-018 processed_transcript Mus_musculus 0 580
ENSMUST00000151279 Meis2-010 processed_transcript Mus_musculus 0 418
ENSMUST00000149217 Meis2-016 processed_transcript Mus_musculus 0 257
ENSMUST00000118654 Meis2-002 retained_intron Mus_musculus 0 248
ENSMUST00000150477 Meis2-017 processed_transcript Mus_musculus 7e-39 167

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