C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: neuroplastin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561898 NPTN-007 ENSG00000156642 9606 - 15:73560934-73563492 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HP CIL_0000HP_0002 CGP 15:73319859-73560014
CIL_0005CB CIL_0005CB_0002 CGP 15:73443158-73634134

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177021 Nptn-004 retained_intron Mus_musculus 0 549
ENSMUST00000176916 Nptn-006 nonsense_mediated_decay Mus_musculus 0 322
ENSMUST00000085651 Nptn-001 protein_coding Mus_musculus 0 322
ENSMUST00000176896 Nptn-010 nonsense_mediated_decay Mus_musculus 0 302
ENSMUST00000176557 Nptn-012 protein_coding Mus_musculus 0 300
ENSMUST00000176250 Nptn-005 protein_coding Mus_musculus 8.99999e-40 167
ENSMUST00000177064 Nptn-007 protein_coding Mus_musculus 1e-34 150
ENSMUST00000177292 Nptn-003 protein_coding Mus_musculus 1e-34 150
ENSMUST00000114121 Nptn-201 protein_coding Mus_musculus 1e-23 113

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