C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuroplastin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176916 Nptn-006 ENSMUSG00000032336 10090 + 9:58629105-58657955 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000176916
Transcript ID Testis
ENSMUST00000176916 4.720±0.87

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001934 ISS positive regulation of protein phosphorylation
GO:0005105 ISS type 1 fibroblast growth factor receptor binding
GO:0007156 ISS homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007204 ISS positive regulation of cytosolic calcium ion concentration
GO:0010976 ISS positive regulation of neuron projection development
GO:0016021 IEA integral component of membrane
GO:0042734 ISS presynaptic membrane
GO:0045743 ISS positive regulation of fibroblast growth factor receptor signaling pathway
GO:0048170 ISS positive regulation of long-term neuronal synaptic plasticity
GO:0050839 ISS cell adhesion molecule binding
GO:0060291 ISS long-term synaptic potentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345330 NPTN-001 protein_coding Homo_sapiens 0 887
ENST00000351217 NPTN-002 protein_coding Homo_sapiens 0 887
ENST00000561898 NPTN-007 retained_intron Homo_sapiens 0 322
ENST00000562924 NPTN-008 protein_coding Homo_sapiens 0 815
ENST00000563691 NPTN-005 protein_coding Homo_sapiens 0 588
ENST00000564551 NPTN-009 processed_transcript Homo_sapiens 0 311
ENST00000565282 NPTN-004 protein_coding Homo_sapiens 0 379
ENST00000565325 NPTN-003 protein_coding Homo_sapiens 0 887

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