C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuroplastin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156642 NPTN 9606 - 15:73560014-73634134 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000345330 NPTN-001 73560014-73633413 protein_coding
  ENST00000351217 NPTN-002 73560014-73634134 protein_coding
  ENST00000561898 NPTN-007 73560934-73563492 retained_intron
  ENST00000562924 NPTN-008 73560834-73633243 protein_coding
  ENST00000563691 NPTN-005 73561910-73633244 protein_coding
  ENST00000563753 NPTN-006 73591636-73633221 retained_intron
  ENST00000564551 NPTN-009 73570274-73633227 processed_transcript
  ENST00000565282 NPTN-004 73570228-73632805 protein_coding
  ENST00000565325 NPTN-003 73560817-73633245 protein_coding
  ENST00000567198 NPTN-011 73592008-73632763 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000345330ENST00000351217ENST00000562924ENST00000563691ENST00000564551ENST00000565325
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000345330 8.854±0.00 17.668±0.00 1.021±0.00 10.341±2.68 16.044±0.00 34.559±0.00 32.525±0.00 36.275±0.00 5.662±3.25 18.419±15.02 3.988±0.00 10.756±2.60 16.473±5.87 28.480±0.00
ENST00000351217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.496±0.00 N/A N/A
ENST00000562924 11.809±0.00 13.615±0.00 3.803±0.00 43.121±5.73 10.360±0.48 15.168±8.84 34.652±24.57 13.441±10.89 5.092±0.32 23.356±16.32 3.984±1.98 24.442±7.78 31.932±3.41 17.559±0.00
ENST00000563691 N/A N/A N/A 17.354±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564551 N/A N/A N/A 30.654±0.00 10.550±0.00 8.444±0.00 6.509±0.00 6.638±0.00 20.516±0.00 9.894±0.00 3.104±0.00 50.963±42.38 101.751±0.00 94.214±0.00
ENST00000565325 N/A 14.418±0.00 5.342±0.00 N/A 6.935±0.00 9.422±0.00 N/A 4.647±0.00 13.558±0.00 7.801±0.00 N/A 18.991±5.67 24.116±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HP CIL_0000HP_0002 CGP 15:73319859-73560014
CIL_0005CB CIL_0005CB_0002 CGP 15:73443158-73634134

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001934 ISS positive regulation of protein phosphorylation
GO:0005105 ISS type 1 fibroblast growth factor receptor binding
GO:0005515 IEA protein binding
GO:0007156 ISS homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007204 ISS positive regulation of cytosolic calcium ion concentration
GO:0009986 IDA cell surface
GO:0010976 ISS positive regulation of neuron projection development
GO:0016021 IEA integral component of membrane
GO:0042734 ISS presynaptic membrane
GO:0045743 ISS positive regulation of fibroblast growth factor receptor signaling pathway
GO:0048170 ISS positive regulation of long-term neuronal synaptic plasticity
GO:0050839 ISS cell adhesion molecule binding
GO:0060291 ISS long-term synaptic potentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043864 nptnb neuroplastin b protein_coding Danio_rerio
ENSDARG00000089817 NPTN (2 of 2) neuroplastin protein_coding Danio_rerio
ENSMUSG00000032336 Nptn neuroplastin protein_coding Mus_musculus

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