C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuroplastin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085651 Nptn-001 ENSMUSG00000032336 10090 + 9:58582292-58652878 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085651
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085651 26.615±4.59 68.126±6.81 28.757±2.40 12.165±2.72 14.299±0.80 45.350±13.28 13.578±0.98 6.205±0.78 14.985±10.16 24.332±17.37 4.475±1.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001934 ISS positive regulation of protein phosphorylation
GO:0005105 ISS type 1 fibroblast growth factor receptor binding
GO:0007156 ISS homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007204 ISS positive regulation of cytosolic calcium ion concentration
GO:0009986 IEA cell surface
GO:0010976 ISS positive regulation of neuron projection development
GO:0016021 IEA integral component of membrane
GO:0042734 ISS presynaptic membrane
GO:0045743 ISS positive regulation of fibroblast growth factor receptor signaling pathway
GO:0048170 ISS positive regulation of long-term neuronal synaptic plasticity
GO:0050839 ISS cell adhesion molecule binding
GO:0060291 ISS long-term synaptic potentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345330 NPTN-001 protein_coding Homo_sapiens 0 2320
ENST00000351217 NPTN-002 protein_coding Homo_sapiens 0 2591
ENST00000561898 NPTN-007 retained_intron Homo_sapiens 0 322
ENST00000562924 NPTN-008 protein_coding Homo_sapiens 0 1458
ENST00000563691 NPTN-005 protein_coding Homo_sapiens 0 968
ENST00000563753 NPTN-006 retained_intron Homo_sapiens 0 368
ENST00000564551 NPTN-009 processed_transcript Homo_sapiens 0 612
ENST00000565282 NPTN-004 protein_coding Homo_sapiens 0 760
ENST00000565325 NPTN-003 protein_coding Homo_sapiens 0 1024
ENST00000567198 NPTN-011 protein_coding Homo_sapiens 3e-40 169

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