C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stimulated by retinoic acid 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000563965 STRA6-005 ENSG00000137868 9606 - 15:74179975-74202858 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001523 TAS retinoid metabolic process
GO:0001568 IMP blood vessel development
GO:0001822 IMP kidney development
GO:0003184 IMP pulmonary valve morphogenesis
GO:0003281 IMP ventricular septum development
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0007507 IMP heart development
GO:0007603 TAS phototransduction, visible light
GO:0007612 IMP learning
GO:0007631 IMP feeding behavior
GO:0016021 IEA integral component of membrane
GO:0030324 IMP lung development
GO:0030325 IMP adrenal gland development
GO:0030540 IMP female genitalia development
GO:0034633 IEA retinol transport
GO:0042297 IMP vocal learning
GO:0042573 IEA retinoic acid metabolic process
GO:0043234 IDA protein complex
GO:0043583 IMP ear development
GO:0043585 IMP nose morphogenesis
GO:0046427 IEA positive regulation of JAK-STAT cascade
GO:0048286 IMP lung alveolus development
GO:0048520 IMP positive regulation of behavior
GO:0048546 IMP digestive tract morphogenesis
GO:0048566 IMP embryonic digestive tract development
GO:0048589 IMP developmental growth
GO:0048745 IMP smooth muscle tissue development
GO:0048844 IMP artery morphogenesis
GO:0050890 IMP cognition
GO:0050905 IMP neuromuscular process
GO:0051183 IEA vitamin transporter activity
GO:0060322 IMP head development
GO:0060323 IMP head morphogenesis
GO:0060325 IMP face morphogenesis
GO:0060426 IMP lung vasculature development
GO:0060539 IMP diaphragm development
GO:0060900 IMP embryonic camera-type eye formation
GO:0061029 IMP eyelid development in camera-type eye
GO:0061038 IMP uterus morphogenesis
GO:0061143 IMP alveolar primary septum development
GO:0061156 IMP pulmonary artery morphogenesis
GO:0061205 IMP paramesonephric duct development
GO:0071939 IEA vitamin A import
GO:0097070 IMP ductus arteriosus closure

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167479 Stra6-201 protein_coding Mus_musculus 0 1386
ENSMUST00000170397 Stra6-202 protein_coding Mus_musculus 0 1386
ENSMUST00000034880 Stra6-002 protein_coding Mus_musculus 0 1386
ENSMUST00000085677 Stra6-001 protein_coding Mus_musculus 0 1386
ENSMUST00000136154 Stra6-012 protein_coding Mus_musculus 0 272
ENSMUST00000134955 Stra6-006 protein_coding Mus_musculus 0 261
ENSMUST00000150820 Stra6-009 protein_coding Mus_musculus 0 241
ENSMUST00000128378 Stra6-008 protein_coding Mus_musculus 0 239
ENSMUST00000147134 Stra6-007 protein_coding Mus_musculus 0 233
ENSMUST00000133287 Stra6-004 protein_coding Mus_musculus 1.96182e-44 185
ENSMUST00000145886 Stra6-003 retained_intron Mus_musculus 6.02558e-44 183
ENSMUST00000136338 Stra6-005 protein_coding Mus_musculus 1e-31 143

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