C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: zinc finger CCCH-type containing 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564161 ZC3H18-004 ENSG00000158545 9606 + 16:88608517-88626699 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000564161
Transcript ID Breast
ENST00000564161 0.286±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XT CIL_0006XT_0001 CGP 16:88570381-88640473

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176629 Zc3h18-005 protein_coding Mus_musculus 0 652
ENSMUST00000093073 Zc3h18-002 protein_coding Mus_musculus 0 652
ENSMUST00000017622 Zc3h18-001 protein_coding Mus_musculus 0 652
ENSMUST00000119613 Gm5939-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000175819 Zc3h18-008 protein_coding Mus_musculus 0 285
ENSMUST00000175798 Zc3h18-010 retained_intron Mus_musculus 1e-32 147
ENSMUST00000177123 Zc3h18-004 retained_intron Mus_musculus 1e-32 147
ENSDART00000064500 sox9b-001 protein_coding Danio_rerio 0.0002 53
ENSDART00000124464 sox9b-201 protein_coding Danio_rerio 0.00008 53

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