C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5939
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119613 Gm5939-001 ENSMUSG00000083258 10090 - X:78855408-78858281 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderHeartLiverOvaryPlacentaTestisENSMUST00000119613
Transcript ID Adipose Adrenal Bladder Heart Liver Ovary Placenta Testis
ENSMUST00000119613 0.009±0.00 0.017±0.00 0.003±0.00 0.012±0.00 0.003±0.00 0.033±0.02 0.007±0.01 0.141±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000111711 chaf1a-202 protein_coding Danio_rerio 0.0002 53
ENSDART00000089534 chaf1a-201 protein_coding Danio_rerio 0.0002 53
ENSDART00000142027 chaf1a-001 protein_coding Danio_rerio 0.0002 53
ENST00000301011 ZC3H18-001 protein_coding Homo_sapiens 0 1890
ENST00000452588 ZC3H18-002 protein_coding Homo_sapiens 0 2577
ENST00000564161 ZC3H18-004 retained_intron Homo_sapiens 0 350
ENST00000567085 ZC3H18-009 protein_coding Homo_sapiens 0 472
ENST00000569435 ZC3H18-007 protein_coding Homo_sapiens 0 322

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