C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMG1 pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565246 SMG1P7-001 ENSG00000261556 9606 - 16:70219870-70245616 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000565246
Transcript ID Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000565246 0.085±0.00 0.204±0.00 0.106±0.05 0.230±0.00 0.052±0.00 0.076±0.00 0.075±0.00 0.028±0.00 0.085±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179331 Smg1-005 protein_coding Mus_musculus 0 1482
ENSMUST00000032891 Smg1-001 protein_coding Mus_musculus 0 1482
ENSMUST00000180009 Smg1-003 retained_intron Mus_musculus 0 414
ENSMUST00000179047 Smg1-002 protein_coding Mus_musculus 1e-20 106

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