C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: neuroplastin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565282 NPTN-004 ENSG00000156642 9606 - 15:73570228-73632805 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HP CIL_0000HP_0002 CGP 15:73319859-73560014
CIL_0005CB CIL_0005CB_0002 CGP 15:73443158-73634134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177292 Nptn-003 protein_coding Mus_musculus 0 1389
ENSMUST00000114121 Nptn-201 protein_coding Mus_musculus 0 760
ENSMUST00000176557 Nptn-012 protein_coding Mus_musculus 0 760
ENSMUST00000085651 Nptn-001 protein_coding Mus_musculus 0 760
ENSMUST00000176896 Nptn-010 nonsense_mediated_decay Mus_musculus 0 704
ENSMUST00000175945 Nptn-009 nonsense_mediated_decay Mus_musculus 0 532
ENSMUST00000177380 Nptn-002 non_stop_decay Mus_musculus 0 399
ENSMUST00000176126 Nptn-008 processed_transcript Mus_musculus 0 383
ENSMUST00000177064 Nptn-007 protein_coding Mus_musculus 0 381
ENSMUST00000176250 Nptn-005 protein_coding Mus_musculus 0 379
ENSMUST00000176916 Nptn-006 nonsense_mediated_decay Mus_musculus 0 379

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