C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc and ring finger 1, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566250 ZNRF1-003 ENSG00000186187 9606 + 16:74999345-75105005 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENST00000566250
Transcript ID Placenta Testis
ENST00000566250 20.637±0.00 43.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PJ CIL_0002PJ_0001 CGP 16:74712955-75000173
CIL_0002PH CIL_0002PH_0001 CGP 16:74871367-75110994
CIL_0004Y8 CIL_0004Y8_0002 CGP 16:74999030-75116771

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168428 Znrf1-202 protein_coding Mus_musculus 0 1158
ENSMUST00000172856 Znrf1-001 protein_coding Mus_musculus 0 1158
ENSMUST00000095176 Znrf1-002 protein_coding Mus_musculus 0 1114
ENSMUST00000173506 Znrf1-003 protein_coding Mus_musculus 0 1018
ENSMUST00000171182 Znrf1-203 protein_coding Mus_musculus 0 841
ENSMUST00000166859 Znrf1-201 protein_coding Mus_musculus 0 320
ENSMUST00000173922 Znrf1-011 nonsense_mediated_decay Mus_musculus 0 320
ENSMUST00000173781 Znrf1-010 protein_coding Mus_musculus 0 320
ENSMUST00000174333 Znrf1-008 protein_coding Mus_musculus 0 320
ENSMUST00000174454 Znrf1-007 protein_coding Mus_musculus 0 320
ENSMUST00000174376 Znrf1-005 nonsense_mediated_decay Mus_musculus 0 320
ENSMUST00000173726 Znrf1-012 protein_coding Mus_musculus 1.96182e-44 183

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