C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cadherin 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566333 CDH13-014 ENSG00000140945 9606 + 16:82626971-83032313 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverENST00000566333
Transcript ID Breast Liver
ENST00000566333 5.005±0.00 3.075±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NV CIL_0003NV_0001 CGP 16:82147798-83800640
CIL_0008L6 CIL_0008L6_0001 VISTA 16:82434004-83036442
CIL_0005JS CIL_0005JS_0001 CGP 16:82626803-83819737

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117160 Cdh13-001 protein_coding Mus_musculus 0 544
ENSMUST00000145849 Cdh13-003 retained_intron Mus_musculus 0 503
ENSMUST00000142551 Cdh13-005 retained_intron Mus_musculus 0 472

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