C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | cadherin 13 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000145849  |
Cdh13-003 |
ENSMUSG00000031841 |
10090 | + |
8:118283755-118852758  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003NV | CIL_0003NV_0002 | CGP | 8:117791645-119324921 |
| CIL_0008L6 | CIL_0008L6_0002 | VISTA | 8:118077907-118680248 |
| CIL_0005JS | CIL_0005JS_0002 | CGP | 8:118283733-119348927 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000268613
|
CDH13-009 | protein_coding | Homo_sapiens | 0 | 671 |
|
ENST00000428848
|
CDH13-005 | protein_coding | Homo_sapiens | 0 | 503 |
|
ENST00000431540
|
CDH13-003 | protein_coding | Homo_sapiens | 0 | 651 |
|
ENST00000539548
|
CDH13-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 344 |
|
ENST00000562601
|
CDH13-011 | nonsense_mediated_decay | Homo_sapiens | 2.00386e-43 | 180 |
|
ENST00000565636
|
CDH13-004 | protein_coding | Homo_sapiens | 0 | 651 |
|
ENST00000566333
|
CDH13-014 | retained_intron | Homo_sapiens | 0 | 503 |
|
ENST00000566620
|
CDH13-201 | protein_coding | Homo_sapiens | 0 | 671 |
|
ENST00000567109
|
CDH13-001 | protein_coding | Homo_sapiens | 0 | 845 |
|
ENST00000568770
|
CDH13-013 | nonsense_mediated_decay | Homo_sapiens | 2.00386e-43 | 180 |
|
ENST00000569144
|
CDH13-012 | nonsense_mediated_decay | Homo_sapiens | 0 | 270 |
|
ENST00000569454
|
CDH13-015 | processed_transcript | Homo_sapiens | 0 | 575 |
