C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATM interactor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566488 ATMIN-004 ENSG00000166454 9606 + 16:81040525-81047346 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLungOvaryENST00000566488
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Lung Ovary
ENST00000566488 1.275±0.00 0.559±0.00 1.440±0.00 0.653±0.16 0.411±0.00 0.859±0.00 0.963±0.00 0.516±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QV CIL_0001QV_0001 CGP 16:81006498-81047358
CIL_0001QN CIL_0001QN_0001 CGP 16:81035847-81077267

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0045502 IPI dynein binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109099 Atmin-001 protein_coding Mus_musculus 0 1698

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