C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium regulated heat stable protein 1, 24kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567554 CARHSP1-012 ENSG00000153048 9606 - 16:8855065-8861713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleOvaryPlacentaTestisENST00000567554
Transcript ID Liver Muscle Ovary Placenta Testis
ENST00000567554 17.581±0.00 1.451±0.00 71.388±0.00 95.509±0.00 125.107±47.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EW CIL_0000EW_0001 CGP 16:8788823-8869012
CIL_0000EV CIL_0000EV_0001 CGP 16:8852942-8964514

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000177 ISS cytoplasmic exosome (RNase complex)
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003730 IDA mRNA 3'-UTR binding
GO:0005829 ISS cytosol
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0019902 NAS phosphatase binding
GO:0035556 TAS intracellular signal transduction
GO:0043186 ISS P granule
GO:0043488 ISS regulation of mRNA stability
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000008537 Carhsp1-201 protein_coding Mus_musculus 0 601
ENSMUST00000060997 Gm9791-001 processed_pseudogene Mus_musculus 0 584

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