C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567759 TAF1C-001 ENSG00000103168 9606 - 16:84177855-84187011 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLiverOvaryPlacentaENST00000567759
Transcript ID Adipose Brain Heart Kidney Liver Ovary Placenta
ENST00000567759 3.388±0.00 2.147±0.00 1.194±0.00 4.806±0.00 0.588±0.00 5.224±0.00 1.439±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZQ CIL_0004ZQ_0001 CGP 16:84122146-84178767
CIL_0002AR CIL_0002AR_0001 CGP 16:84145287-84187070
CIL_0002AS CIL_0002AS_0001 CGP 16:84177847-84197168

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI:IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006360 TAS transcription from RNA polymerase I promoter
GO:0006361 TAS transcription initiation from RNA polymerase I promoter
GO:0006362 TAS transcription elongation from RNA polymerase I promoter
GO:0006363 TAS termination of RNA polymerase I transcription
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0010467 TAS gene expression

Homologs

No Homologs available.

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