C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IMP (inosine monophosphate) dehydrogenase 1 pseudogene 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567885 IMPDH1P11-001 ENSG00000261647 9606 + 16:10111382-10112885 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverOvaryTestisENST00000567885
Transcript ID Bladder Brain Breast Liver Ovary Testis
ENST00000567885 0.038±0.00 0.051±0.01 0.228±0.00 0.039±0.00 0.105±0.00 0.029±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EM CIL_0000EM_0001 CGP 16:9091648-10182754
CIL_0007XM CIL_0007XM_0001 VISTA 16:9925972-10527019

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162099 Impdh1-002 protein_coding Mus_musculus 0 1386
ENSMUST00000159124 Impdh1-003 protein_coding Mus_musculus 0 1386
ENSMUST00000078155 Impdh1-001 protein_coding Mus_musculus 0 1386
ENSMUST00000162739 Impdh1-004 protein_coding Mus_musculus 0 1317
ENSMUST00000160878 Impdh1-005 protein_coding Mus_musculus 0 1070
ENSMUST00000161654 Impdh1-008 retained_intron Mus_musculus 0 488
ENSMUST00000162242 Impdh1-010 protein_coding Mus_musculus 0 353

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