C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc and ring finger 1, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000568351 ZNRF1-010 ENSG00000186187 9606 + 16:75104784-75108590 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartLungMuscleTestisENST00000568351
Transcript ID Adipose Adrenal Brain Colon Heart Lung Muscle Testis
ENST00000568351 8.827±0.00 12.344±0.00 15.772±0.00 7.277±0.00 13.398±0.00 14.213±0.00 12.697±0.00 16.569±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PJ CIL_0002PJ_0001 CGP 16:74712955-75000173
CIL_0002PH CIL_0002PH_0001 CGP 16:74871367-75110994
CIL_0004Y8 CIL_0004Y8_0002 CGP 16:74999030-75116771

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166859 Znrf1-201 protein_coding Mus_musculus 0 335
ENSMUST00000168428 Znrf1-202 protein_coding Mus_musculus 0 335
ENSMUST00000172856 Znrf1-001 protein_coding Mus_musculus 0 335
ENSMUST00000171182 Znrf1-203 protein_coding Mus_musculus 0 331
ENSMUST00000095176 Znrf1-002 protein_coding Mus_musculus 0 331
ENSMUST00000173922 Znrf1-011 nonsense_mediated_decay Mus_musculus 2.99878e-43 180
ENSMUST00000173781 Znrf1-010 protein_coding Mus_musculus 2.99878e-43 180
ENSMUST00000174333 Znrf1-008 protein_coding Mus_musculus 2.99878e-43 180
ENSMUST00000174454 Znrf1-007 protein_coding Mus_musculus 2.99878e-43 180
ENSMUST00000174376 Znrf1-005 nonsense_mediated_decay Mus_musculus 2.99878e-43 180
ENSMUST00000173726 Znrf1-012 protein_coding Mus_musculus 2.99878e-43 180
ENSMUST00000173506 Znrf1-003 protein_coding Mus_musculus 2.99878e-43 180

Loading