C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 16 open reading frame 58
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000568491 C16orf58-006 ENSG00000140688 9606 - 16:31489494-31493738 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000568491
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000568491 2.519±0.00 10.043±0.00 4.478±0.00 3.560±1.74 2.426±1.06 0.988±0.00 1.136±0.00 8.056±0.00 2.399±0.00 0.813±0.00 11.244±4.81 6.998±1.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090H CIL_00090H_0001 VISTA 16:31421736-32023283
CIL_000708 CIL_000708_0001 CGP 16:31471585-31490860
CIL_00035J CIL_00035J_0001 CGP 16:31483002-31509309

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154003 BC017158-002 retained_intron Mus_musculus 0 412
ENSMUST00000126263 BC017158-004 nonsense_mediated_decay Mus_musculus 0 409
ENSMUST00000155177 BC017158-003 retained_intron Mus_musculus 0 401
ENSMUST00000033044 BC017158-001 protein_coding Mus_musculus 0 401
ENSMUST00000147091 BC017158-005 retained_intron Mus_musculus 0 326

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