C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 35 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000568784 VPS35-002 ENSG00000069329 9606 - 16:46659677-46689147 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000568784
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000568784 13.814±0.00 9.109±0.00 5.179±0.00 17.643±4.07 12.103±3.47 14.698±7.29 2.999±0.19 13.508±7.86 5.722±1.63 8.476±2.70 6.172±2.88 15.148±4.37 16.587±2.09 24.862±2.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VM CIL_0002VM_0001 CGP 16:46656132-46698394

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034131 Vps35-201 protein_coding Mus_musculus 0 3751

Loading