C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heme oxygenase (decycling) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000570646 HMOX2-001 ENSG00000103415 9606 + 16:4475924-4510347 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLungOvaryPlacentaTestisENST00000570646
Transcript ID Brain Breast Heart Lung Ovary Placenta Testis
ENST00000570646 8.482±0.00 0.802±0.00 1.058±0.00 0.752±0.00 11.433±2.92 10.883±0.00 12.967±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BN CIL_0002BN_0001 CGP 16:4425805-4495763
CIL_00009E CIL_00009E_0001 CGP 16:4461680-4510347
CIL_0000TZ CIL_0000TZ_0001 CGP 16:4474690-4538828

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 IDA response to hypoxia
GO:0004392 IEA:IDA heme oxygenase (decyclizing) activity
GO:0005515 IPI protein binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0006778 TAS porphyrin-containing compound metabolic process
GO:0006788 IEA heme oxidation
GO:0006879 TAS cellular iron ion homeostasis
GO:0016020 IDA membrane
GO:0042167 TAS heme catabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004172 Hmox2-001 protein_coding Mus_musculus 0 1118
ENSMUST00000120232 Hmox2-002 protein_coding Mus_musculus 0 1088
ENSMUST00000118885 Hmox2-003 protein_coding Mus_musculus 0 1086
ENSMUST00000121529 Hmox2-005 protein_coding Mus_musculus 0 785
ENSMUST00000140367 Hmox2-004 protein_coding Mus_musculus 0 340
ENSMUST00000154117 Hmox2-006 protein_coding Mus_musculus 0 296
ENSMUST00000004173 Cdip1-001 protein_coding Mus_musculus 0 200

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