C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MKL/myocardin-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000571589 MKL2-001 ENSG00000186260 9606 + 16:14071322-14266771 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000571589
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000571589 4.604±0.00 1.905±0.00 9.921±0.00 1.305±0.32 1.952±0.00 3.416±0.00 1.196±0.00 0.941±0.26 1.842±0.04 0.907±0.00 2.268±2.12 1.044±0.15 2.874±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RP CIL_0002RP_0002 CGP 16:13920157-14266773
CIL_0007DW CIL_0007DW_0001 CGP 16:14071321-14632728

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003713 IDA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IC nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007517 IEA muscle organ development
GO:0045844 IDA positive regulation of striated muscle tissue development
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009713 Mkl2-003 protein_coding Mus_musculus 0 1860
ENSMUST00000149359 Mkl2-001 protein_coding Mus_musculus 0 1860
ENSMUST00000056715 Mkl2-201 protein_coding Mus_musculus 0 193
ENSMUST00000115809 Mkl2-004 protein_coding Mus_musculus 0 193
ENSDART00000112456 MKL2 (1 of 3)-201 protein_coding Danio_rerio 1e-20 108
ENSDART00000127655 mkl2a-201 protein_coding Danio_rerio 1e-20 108
ENSDART00000153177 mkl2a-001 protein_coding Danio_rerio 1e-20 108

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