C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin binding transcription activator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000573004 CAMTA2-005 ENSG00000108509 9606 - 17:4980436-4987632 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLungENST00000573004
Transcript ID Brain Heart Lung
ENST00000573004 3.742±0.00 0.761±0.00 1.525±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WD CIL_0004WD_0001 CGP 17:4959226-4987652
CIL_00006G CIL_00006G_0001 CGP 17:4967992-4997610

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145823 Camta2-003 nonsense_mediated_decay Mus_musculus 0 1323
ENSMUST00000125687 Camta2-001 retained_intron Mus_musculus 0 872
ENSMUST00000036299 Camta2-004 protein_coding Mus_musculus 0 782
ENSMUST00000119120 Camta2-007 protein_coding Mus_musculus 0 754
ENSMUST00000108544 Camta2-005 protein_coding Mus_musculus 0 754
ENSMUST00000100933 Camta2-006 protein_coding Mus_musculus 0 754
ENSMUST00000120261 Camta2-009 protein_coding Mus_musculus 0 632
ENSMUST00000108545 Camta2-008 protein_coding Mus_musculus 0 632
ENSMUST00000150224 Camta2-002 retained_intron Mus_musculus 0.00000000001 75

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