C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | vacuolar protein sorting 53 homolog (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000573028  |
VPS53-005 |
ENSG00000141252 |
9606 | - |
17:531968-714856  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006AN | CIL_0006AN_0002 | CGP | 17:439978-721717 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000094015
|
Vps53-013 | protein_coding | Mus_musculus | 0 | 1890 |
|
ENSMUST00000056601
|
Vps53-001 | protein_coding | Mus_musculus | 0 | 1890 |
|
ENSMUST00000169734
|
Vps53-012 | nonsense_mediated_decay | Mus_musculus | 0 | 1862 |
|
ENSMUST00000167114
|
Vps53-016 | protein_coding | Mus_musculus | 0 | 1256 |
|
ENSMUST00000166752
|
Vps53-015 | nonsense_mediated_decay | Mus_musculus | 0 | 1149 |
|
ENSMUST00000143163
|
Vps53-006 | retained_intron | Mus_musculus | 0 | 1129 |
|
ENSMUST00000108419
|
Vps53-014 | protein_coding | Mus_musculus | 0 | 1125 |
|
ENSMUST00000170143
|
Vps53-008 | retained_intron | Mus_musculus | 0 | 808 |
|
ENSMUST00000166084
|
Vps53-011 | processed_transcript | Mus_musculus | 0 | 654 |
|
ENSMUST00000166436
|
Vps53-009 | protein_coding | Mus_musculus | 0 | 518 |
|
ENSMUST00000163878
|
Vps53-010 | nonsense_mediated_decay | Mus_musculus | 0 | 442 |
|
ENSMUST00000141773
|
Vps53-004 | processed_transcript | Mus_musculus | 0 | 422 |
|
ENSMUST00000143459
|
Vps53-005 | processed_transcript | Mus_musculus | 0 | 392 |
|
ENSMUST00000147797
|
Nol9-003 | processed_transcript | Mus_musculus | 0.0002 | 53 |
