C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | vacuolar protein sorting 53 (yeast) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000143163  |
Vps53-006 |
ENSMUSG00000017288 |
10090 | - |
11:76062041-76092679  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006AN | CIL_0006AN_0003 | CGP | 11:76019194-76179647 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000291074
|
VPS53-002 | protein_coding | Homo_sapiens | 0 | 1129 |
|
ENST00000389040
|
VPS53-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 676 |
|
ENST00000401468
|
VPS53-003 | protein_coding | Homo_sapiens | 0 | 1129 |
|
ENST00000437048
|
VPS53-001 | protein_coding | Homo_sapiens | 0 | 1125 |
|
ENST00000570359
|
VPS53-010 | retained_intron | Homo_sapiens | 0 | 202 |
|
ENST00000570771
|
VPS53-018 | retained_intron | Homo_sapiens | 8e-20 | 100 |
|
ENST00000571805
|
VPS53-006 | protein_coding | Homo_sapiens | 0 | 1129 |
|
ENST00000572607
|
VPS53-016 | retained_intron | Homo_sapiens | 0 | 658 |
|
ENST00000573028
|
VPS53-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 1129 |
|
ENST00000576149
|
VPS53-009 | processed_transcript | Homo_sapiens | 0 | 1125 |
