C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane channel-like 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000574033 TMC5-012 ENSG00000103534 9606 + 16:19486941-19498277 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLiverLungMuscleOvaryTestisENST00000574033
Transcript ID Adipose Breast Colon Liver Lung Muscle Ovary Testis
ENST00000574033 0.156±0.00 2.872±0.00 0.305±0.00 0.297±0.04 6.263±0.00 0.058±0.00 5.149±0.00 2.551±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MY CIL_0006MY_0001 CGP 16:19410496-19522145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098088 Tmc5-201 protein_coding Mus_musculus 0 446
ENSMUST00000057320 Tmc5-003 protein_coding Mus_musculus 0 446
ENSMUST00000121744 Tmc5-002 protein_coding Mus_musculus 0 446
ENSMUST00000121715 Tmc5-001 protein_coding Mus_musculus 0 446

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