C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: derlin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000574952 DERL2-003 ENSG00000072849 9606 - 17:5480124-5486276 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FL CIL_0000FL_0001 CGP 17:5440912-5486811
CIL_0002PM CIL_0002PM_0001 CGP 17:5471251-5490814

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131340 Derl2-004 nonsense_mediated_decay Mus_musculus 0 302
ENSMUST00000140712 Derl2-003 retained_intron Mus_musculus 1e-23 113
ENSMUST00000132198 Derl2-006 nonsense_mediated_decay Mus_musculus 5e-23 111
ENSMUST00000018586 Derl2-005 nonsense_mediated_decay Mus_musculus 7e-22 108
ENSMUST00000171041 Derl2-007 protein_coding Mus_musculus 7e-22 108
ENSMUST00000143850 Derl2-001 protein_coding Mus_musculus 7e-22 108
ENSMUST00000108523 Derl2-002 protein_coding Mus_musculus 7e-22 108

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