C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Der1-like domain family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143850 Derl2-001 ENSMUSG00000018442 10090 - 11:71007442-71019303 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000143850
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000143850 3.724±0.44 4.314±1.69 8.455±1.01 7.615±4.56 2.717±0.95 3.331±0.76 2.554±0.51 5.404±1.04 10.949±2.51 4.896±1.27 2.198±0.27 3.785±2.59 7.691±3.21 3.188±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FL CIL_0000FL_0002 CGP 11:70984091-71019841
CIL_0002PM CIL_0002PM_0002 CGP 11:71007164-71027371

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001967 IMP suckling behavior
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005769 IDA early endosome
GO:0005770 IDA late endosome
GO:0005783 IDA endoplasmic reticulum
GO:0008284 ISS positive regulation of cell proliferation
GO:0016020 IEA membrane
GO:0030176 ISS integral component of endoplasmic reticulum membrane
GO:0030307 ISS positive regulation of cell growth
GO:0030433 ISS ER-associated ubiquitin-dependent protein catabolic process
GO:0030968 ISS endoplasmic reticulum unfolded protein response
GO:0030970 IMP:ISS retrograde protein transport, ER to cytosol

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000158771 DERL2-001 protein_coding Homo_sapiens 0 1450
ENST00000435250 AC024082.3-001 processed_pseudogene Homo_sapiens 0 220
ENST00000570848 DERL2-008 protein_coding Homo_sapiens 0 516
ENST00000571476 DERL2-011 nonsense_mediated_decay Homo_sapiens 0 501
ENST00000571968 DERL2-004 processed_transcript Homo_sapiens 0 209
ENST00000571971 DERL2-009 protein_coding Homo_sapiens 0 815
ENST00000572834 DERL2-010 protein_coding Homo_sapiens 0 512
ENST00000573547 DERL2-013 retained_intron Homo_sapiens 0 562
ENST00000573637 DERL2-002 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000574700 DERL2-005 retained_intron Homo_sapiens 0 366
ENST00000574952 DERL2-003 nonsense_mediated_decay Homo_sapiens 7e-22 108
ENST00000575209 DERL2-006 retained_intron Homo_sapiens 0 361
ENST00000575605 DERL2-012 protein_coding Homo_sapiens 0 446
ENST00000576551 DERL2-007 nonsense_mediated_decay Homo_sapiens 0 385

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