C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Der1-like domain family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171041 Derl2-007 ENSMUSG00000018442 10090 - 11:71009933-71019841 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000171041
Transcript ID Adipose Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000171041 4.838±0.99 4.167±0.00 3.222±0.00 4.095±0.88 4.305±0.38 8.927±2.01 2.655±0.55 11.784±1.59 19.502±7.87 10.747±2.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FL CIL_0000FL_0002 CGP 11:70984091-71019841
CIL_0002PM CIL_0002PM_0002 CGP 11:71007164-71027371

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001967 IMP suckling behavior
GO:0003674 ND molecular_function
GO:0005769 IDA early endosome
GO:0005770 IDA late endosome
GO:0005783 IDA endoplasmic reticulum
GO:0030970 IMP retrograde protein transport, ER to cytosol

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000158771 DERL2-001 protein_coding Homo_sapiens 0 1206
ENST00000435250 AC024082.3-001 processed_pseudogene Homo_sapiens 0 219
ENST00000570848 DERL2-008 protein_coding Homo_sapiens 0 368
ENST00000571476 DERL2-011 nonsense_mediated_decay Homo_sapiens 0 501
ENST00000571968 DERL2-004 processed_transcript Homo_sapiens 0 209
ENST00000571971 DERL2-009 protein_coding Homo_sapiens 0 665
ENST00000572834 DERL2-010 protein_coding Homo_sapiens 0 512
ENST00000573547 DERL2-013 retained_intron Homo_sapiens 0 562
ENST00000573637 DERL2-002 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000574700 DERL2-005 retained_intron Homo_sapiens 0 366
ENST00000574952 DERL2-003 nonsense_mediated_decay Homo_sapiens 7e-22 108
ENST00000575209 DERL2-006 retained_intron Homo_sapiens 0 217
ENST00000575605 DERL2-012 protein_coding Homo_sapiens 0 446
ENST00000576551 DERL2-007 nonsense_mediated_decay Homo_sapiens 0 385

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