C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CORO7-PAM16 readthrough
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000575334 CORO7-PAM16-002 ENSG00000103426 9606 - 16:4340251-4420494 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009U CIL_00009U_0001 CGP 16:4314761-4355607
CIL_00009Y CIL_00009Y_0001 CGP 16:4331549-4420494

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038552 Coro7-001 protein_coding Mus_musculus 0 1354
ENSMUST00000135823 Coro7-002 nonsense_mediated_decay Mus_musculus 0 767
ENSMUST00000090480 Coro7-003 protein_coding Mus_musculus 0 721
ENSMUST00000123031 Coro7-004 retained_intron Mus_musculus 0 549
ENSMUST00000127850 Coro7-012 retained_intron Mus_musculus 0 191
ENSMUST00000057649 Gm9803-201 protein_coding Mus_musculus 1e-26 126
ENSMUST00000139534 Pam16-002 retained_intron Mus_musculus 1e-26 126
ENSMUST00000014445 Pam16-001 protein_coding Mus_musculus 1e-26 126
ENSMUST00000156889 Pam16-003 nonsense_mediated_decay Mus_musculus 1e-26 126

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