C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: clusterin associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000576634 CLUAP1-001 ENSG00000103351 9606 + 16:3500924-3539048 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryENST00000576634
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary
ENST00000576634 3.170±0.00 5.618±0.00 2.244±0.00 1.898±0.00 5.240±0.59 1.746±0.73 2.959±0.00 3.110±1.15 0.916±0.00 5.198±1.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EX CIL_0005EX_0001 CGP 16:3493484-3539048
CIL_0001DL CIL_0001DL_0001 CGP 16:3500924-3577400

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005813 IBA centrosome
GO:0005929 IBA cilium
GO:0030992 IBA intraciliary transport particle B
GO:0042384 IBA cilium assembly
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040881 Cluap1-001 protein_coding Mus_musculus 0 1469
ENSMUST00000139294 Cluap1-002 nonsense_mediated_decay Mus_musculus 0 977
ENSMUST00000124849 Cluap1-003 protein_coding Mus_musculus 0 767
ENSMUST00000145150 Cluap1-005 protein_coding Mus_musculus 0 684
ENSMUST00000176233 Gm20695-001 protein_coding Mus_musculus 0 617
ENSMUST00000146935 Gm20695-002 processed_transcript Mus_musculus 0 580
ENSMUST00000137745 Cluap1-004 retained_intron Mus_musculus 0 335

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