C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulatory associated protein of MTOR, complex 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000577161 RPTOR-003 ENSG00000141564 9606 + 17:80544831-80909867 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyOvaryENST00000577161
Transcript ID Adrenal Brain Colon Kidney Ovary
ENST00000577161 2.222±0.00 0.947±0.00 0.980±0.00 0.547±0.00 1.137±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042J CIL_00042J_0001 CGP 17:80467148-80966371
CIL_00042G CIL_00042G_0001 CGP 17:80544819-81009517

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026671 Rptor-003 protein_coding Mus_musculus 0 3184
ENSMUST00000127899 Rptor-004 retained_intron Mus_musculus 0 2750
ENSMUST00000147772 Rptor-012 retained_intron Mus_musculus 0 2252
ENSMUST00000125583 Rptor-008 retained_intron Mus_musculus 0 2165
ENSMUST00000147781 Rptor-001 nonsense_mediated_decay Mus_musculus 0 1519
ENSMUST00000130049 Rptor-002 retained_intron Mus_musculus 0 1474
ENSMUST00000126802 Rptor-005 retained_intron Mus_musculus 0 1092
ENSMUST00000124401 Rptor-009 protein_coding Mus_musculus 0 414
ENSMUST00000131217 Rptor-011 nonsense_mediated_decay Mus_musculus 0 309
ENSMUST00000136662 Rptor-006 nonsense_mediated_decay Mus_musculus 0 305
ENSMUST00000139728 Rptor-007 nonsense_mediated_decay Mus_musculus 0 278

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