C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulatory associated protein of MTOR, complex 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026671 Rptor-003 ENSMUSG00000025583 10090 + 11:119603149-119899407 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026671
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026671 4.601±0.94 11.873±3.88 2.847±0.14 5.377±0.38 5.606±2.42 3.358±1.08 2.628±0.39 3.307±1.05 2.237±0.81 4.459±1.17 5.359±0.81 7.008±2.63 3.977±2.13 1.867±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042J CIL_00042J_0002 CGP 11:119538719-119899576
CIL_00042G CIL_00042G_0002 CGP 11:119602905-119919548

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001030 IEA RNA polymerase III type 1 promoter DNA binding
GO:0001031 IEA RNA polymerase III type 2 promoter DNA binding
GO:0001032 IEA RNA polymerase III type 3 promoter DNA binding
GO:0001156 IEA TFIIIC-class transcription factor binding
GO:0001938 IEA positive regulation of endothelial cell proliferation
GO:0005737 IEA cytoplasm
GO:0005764 IEA lysosome
GO:0005765 IEA lysosomal membrane
GO:0008361 IEA regulation of cell size
GO:0016049 IEA cell growth
GO:0019901 IEA protein kinase binding
GO:0030425 IEA dendrite
GO:0031669 IEA cellular response to nutrient levels
GO:0031929 IEA TOR signaling
GO:0031931 ISO TORC1 complex
GO:0032008 IEA positive regulation of TOR signaling
GO:0032403 IEA protein complex binding
GO:0042325 IEA regulation of phosphorylation
GO:0043025 IEA neuronal cell body
GO:0045945 IEA positive regulation of transcription from RNA polymerase III promoter
GO:0071230 IEA cellular response to amino acid stimulus
GO:0071889 IEA 14-3-3 protein binding
GO:0071902 IEA positive regulation of protein serine/threonine kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306801 RPTOR-001 protein_coding Homo_sapiens 0 4793
ENST00000544334 RPTOR-006 protein_coding Homo_sapiens 0 2331
ENST00000570891 RPTOR-005 protein_coding Homo_sapiens 0 1633
ENST00000573163 RPTOR-010 processed_transcript Homo_sapiens 0 490
ENST00000573837 RPTOR-009 retained_intron Homo_sapiens 0 431
ENST00000574767 RPTOR-004 nonsense_mediated_decay Homo_sapiens 0 1363
ENST00000575542 RPTOR-002 processed_transcript Homo_sapiens 0 3842
ENST00000576366 RPTOR-011 protein_coding Homo_sapiens 0 300
ENST00000577161 RPTOR-003 processed_transcript Homo_sapiens 0 3184

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