C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00042G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141564-ENSG00000176108 CGP 9606 17:80544819-81009517
GeneTranscriptPositionBiotype
ENSG00000141564 (RPTOR)
regulatory associated protein of MTOR, complex 1 		ENST00000306801 (RPTOR-001) 80545268-80966368 protein_coding
ENST00000544334 (RPTOR-006) 80545468-80966368 protein_coding
ENST00000570891 (RPTOR-005) 80544877-80823620 protein_coding
ENST00000572733 (RPTOR-008) 80708933-80754104 processed_transcript
ENST00000573163 (RPTOR-010) 80948550-80961444 processed_transcript
ENST00000573746 (RPTOR-007) 80545666-80593805 processed_transcript
ENST00000573837 (RPTOR-009) 80945567-80949545 retained_intron
ENST00000574767 (RPTOR-004) 80544819-80858124 nonsense_mediated_decay
ENST00000575542 (RPTOR-002) 80743287-80966371 processed_transcript
ENST00000576366 (RPTOR-011) 80922724-80924172 protein_coding
ENST00000577161 (RPTOR-003) 80544831-80909867 processed_transcript
ENSG00000176108 (CHMP6)
charged multivesicular body protein 6 		ENST00000325167 (CHMP6-001) 80991841-81000133 protein_coding
ENST00000571457 (CHMP6-004) 80994644-81009517 protein_coding
ENST00000572525 (CHMP6-002) 80991598-80999145 protein_coding
ENST00000572778 (CHMP6-003) 80994581-80998670 protein_coding
ENSG00000232083 (RPL31P7)
ribosomal protein L31 pseudogene 7 		ENST00000448339 (RPL31P7-001) 80602549-80602926 processed_pseudogene
ENSG00000240270 (RPL12P37)
ribosomal protein L12 pseudogene 37 		ENST00000486874 (RPL12P37-001) 80976454-80976948 processed_pseudogene
ENSG00000262833 (RP11-28G8.1)
 ENST00000570335 (RP11-28G8.1-001) 80801640-80805632 antisense
ENSG00000263218 (CTD-2561B21.7)
 ENST00000576215 (CTD-2561B21.7-001) 80999509-81000130 antisense
ENST00000577061 (CTD-2561B21.7-002) 80999518-81000127 antisense
ENSG00000280351 (CTD-2561B21.8)
 ENST00000624788 (CTD-2561B21.8-201) 81003335-81005069 TEC
ENST00000625110 (CTD-2561B21.8-001) 81003335-81005132 TEC
CIL_00042G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025583-ENSMUSG00000025371 CGP 10090 11:119602905-119919548
GeneTranscriptPositionBiotype
ENSMUSG00000025371 (Chmp6)
charged multivesicular body protein 6 		ENSMUST00000026434 (Chmp6-001) 119913810-119919548 protein_coding
ENSMUST00000124199 (Chmp6-003) 119913830-119916094 protein_coding
ENSMUST00000132197 (Chmp6-002) 119913441-119917008 protein_coding
ENSMUST00000137055 (Chmp6-006) 119916731-119918628 retained_intron
ENSMUST00000139814 (Chmp6-005) 119915822-119919048 retained_intron
ENSMUST00000148232 (Chmp6-004) 119914015-119916701 protein_coding
ENSMUSG00000025583 (Rptor)
regulatory associated protein of MTOR, complex 1 		ENSMUST00000026671 (Rptor-003) 119603149-119899407 protein_coding
ENSMUST00000124401 (Rptor-009) 119822947-119856298 protein_coding
ENSMUST00000125583 (Rptor-008) 119602905-119823176 retained_intron
ENSMUST00000126802 (Rptor-005) 119811246-119867389 retained_intron
ENSMUST00000127899 (Rptor-004) 119655944-119865810 retained_intron
ENSMUST00000130049 (Rptor-002) 119602995-119782281 retained_intron
ENSMUST00000131217 (Rptor-011) 119857444-119884967 nonsense_mediated_decay
ENSMUST00000136662 (Rptor-006) 119856259-119896153 nonsense_mediated_decay
ENSMUST00000139728 (Rptor-007) 119798773-119846955 nonsense_mediated_decay
ENSMUST00000147772 (Rptor-012) 119603015-119845039 retained_intron
ENSMUST00000147781 (Rptor-001) 119603698-119899576 nonsense_mediated_decay
ENSMUST00000148860 (Rptor-010) 119856309-119857802 retained_intron
ENSMUSG00000083870 (Gm11761)
predicted gene 11761 		ENSMUST00000121392 (Gm11761-001) 119646186-119646630 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042G_0001ENSG00000141564ENST00000306801ENST00000544334ENST00000570891ENST00000572733ENST00000573163ENST00000573746ENST00000573837ENST00000574767ENST00000575542ENST00000576366ENST00000577161ENSG00000176108ENST00000325167ENST00000571457ENST00000572525ENST00000572778ENSG00000232083ENST00000448339ENSG00000240270ENST00000486874ENSG00000262833ENST00000570335ENSG00000263218ENST00000576215ENST00000577061ENSG00000280351ENST00000624788ENST00000625110CIL_00042G_0002ENSMUSG00000025371ENSMUST00000026434ENSMUST00000124199ENSMUST00000132197ENSMUST00000137055ENSMUST00000139814ENSMUST00000148232ENSMUSG00000025583ENSMUST00000026671ENSMUST00000124401ENSMUST00000125583ENSMUST00000126802ENSMUST00000127899ENSMUST00000130049ENSMUST00000131217ENSMUST00000136662ENSMUST00000139728ENSMUST00000147772ENSMUST00000147781ENSMUST00000148860ENSMUSG00000083870ENSMUST00000121392
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042G_0001ENSG00000141564ENST00000306801ENST00000544334ENST00000570891ENST00000574767ENST00000575542ENST00000577161ENSG00000176108ENST00000325167ENST00000571457ENST00000572525ENST00000572778ENSG00000232083ENST00000448339ENSG00000240270ENST00000486874ENSG00000262833ENST00000570335ENSG00000263218ENST00000576215ENST00000577061ENSG00000280351ENST00000624788ENST00000625110CIL_00042G_0002ENSMUSG00000025371ENSMUST00000026434ENSMUST00000124199ENSMUST00000132197ENSMUSG00000025583ENSMUST00000026671ENSMUST00000147781ENSMUSG00000083870ENSMUST00000121392
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141564 ENST00000306801 2.393±0.00 3.603±0.00 1.188±0.00 4.882±0.00 1.828±0.63 0.933±0.64 2.948±0.00 1.254±0.27 1.387±0.38 1.648±0.49 2.690±0.00 2.283±0.57 3.218±1.26 3.494±0.91
ENST00000544334 2.358±0.00 N/A N/A 2.152±0.00 0.738±0.00 0.914±0.00 0.777±0.00 0.291±0.00 0.719±0.00 N/A 2.513±0.70 N/A 1.056±0.00 N/A
ENST00000570891 N/A N/A N/A N/A 1.219±0.00 0.991±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574767 N/A N/A N/A N/A N/A N/A N/A 0.731±0.00 N/A N/A N/A N/A N/A N/A
ENST00000575542 N/A N/A N/A 3.006±0.00 2.928±0.00 1.908±0.00 1.062±0.00 1.600±0.00 1.460±0.00 1.328±0.00 4.562±4.21 1.704±0.00 1.320±0.00 2.020±0.00
ENST00000576366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577161 N/A 2.222±0.00 N/A 0.947±0.00 N/A 0.980±0.00 N/A 0.547±0.00 N/A N/A N/A 1.137±0.18 N/A N/A
ENSG00000176108 ENST00000325167 8.673±0.00 12.185±0.00 0.493±0.00 3.252±2.71 8.076±0.00 2.327±1.39 4.684±0.00 7.975±0.00 3.865±3.65 2.626±2.12 2.877±2.47 7.940±5.89 16.736±6.45 5.430±1.23
ENST00000571457 N/A N/A 0.861±0.00 N/A 0.406±0.00 0.356±0.00 N/A N/A 1.708±0.00 N/A N/A N/A N/A 2.635±0.00
ENST00000572525 N/A 7.515±0.00 N/A 1.962±1.22 N/A 3.125±0.00 3.233±0.00 5.911±0.00 0.448±0.00 2.563±1.73 N/A 3.298±2.62 N/A 3.330±0.47
ENST00000572778 N/A N/A N/A N/A N/A N/A 0.233±0.00 1.512±0.00 N/A N/A N/A 0.386±0.00 N/A 2.406±0.00
ENSG00000232083 ENST00000448339 N/A 0.092±0.00 0.180±0.00 0.096±0.00 N/A 0.343±0.00 0.043±0.00 0.047±0.00 0.175±0.00 0.044±0.00 0.164±0.00 0.077±0.00 N/A 0.125±0.00
ENSG00000240270 ENST00000486874 0.214±0.00 0.347±0.00 N/A 0.165±0.00 N/A 0.181±0.00 0.034±0.00 0.118±0.00 0.034±0.00 0.336±0.00 0.523±0.00 0.068±0.00 N/A 0.171±0.00
ENSG00000262833 ENST00000570335 0.044±0.00 0.234±0.00 0.154±0.00 0.114±0.03 0.148±0.08 0.055±0.02 0.070±0.00 0.113±0.00 0.030±0.00 0.043±0.03 0.018±0.00 0.065±0.07 0.014±0.00 0.074±0.01
ENSG00000263218 ENST00000576215 N/A N/A N/A N/A N/A N/A N/A N/A 11.531±0.00 N/A 5.689±0.00 N/A 24.456±3.51 N/A
ENST00000577061 N/A N/A N/A N/A N/A N/A N/A N/A 10.742±0.00 N/A N/A N/A N/A N/A
ENSG00000280351 ENST00000624788 0.252±0.00 N/A 0.102±0.00 N/A 0.291±0.06 0.626±0.26 0.205±0.00 0.145±0.01 0.235±0.00 0.158±0.13 0.799±0.00 0.121±0.00 0.153±0.08 0.504±0.28
ENST00000625110 N/A 0.436±0.00 N/A 0.356±0.00 N/A N/A N/A 0.177±0.00 N/A N/A N/A 0.581±0.34 N/A 0.412±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025371 ENSMUST00000026434 19.977±2.59 31.474±11.66 17.156±1.91 18.248±6.96 23.635±8.68 57.007±5.72 10.941±1.93 38.486±8.25 13.732±3.02 26.123±2.20 15.543±0.58 29.112±11.14 40.513±12.95 20.915±8.35
ENSMUST00000124199 N/A 28.419±0.00 N/A N/A N/A N/A N/A N/A 10.705±0.00 N/A N/A N/A N/A N/A
ENSMUST00000132197 N/A N/A N/A 16.218±0.00 N/A N/A N/A N/A N/A N/A N/A 17.187±0.00 10.712±0.00 82.302±0.00
ENSMUST00000137055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025583 ENSMUST00000026671 4.601±0.94 11.873±3.88 2.847±0.14 5.377±0.38 5.606±2.42 3.358±1.08 2.628±0.39 3.307±1.05 2.237±0.81 4.459±1.17 5.359±0.81 7.008±2.63 3.977±2.13 1.867±0.73
ENSMUST00000124401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147781 5.692±0.53 6.411±2.13 4.109±1.18 7.965±3.72 5.046±0.39 6.867±1.67 3.996±1.26 4.038±1.05 3.979±1.94 5.681±0.34 1.329±0.41 7.708±3.08 4.443±2.53 7.617±2.96
ENSMUST00000148860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083870 ENSMUST00000121392 0.361±0.19 N/A N/A 0.079±0.00 N/A N/A 0.113±0.00 0.267±0.04 0.064±0.05 0.235±0.08 N/A N/A 0.018±0.00 0.603±0.39

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