| Transcript ID | Breast | Colon | Heart | Muscle |
|---|---|---|---|---|
| ENST00000577831 | 0.780±0.00 | 1.276±0.00 | 1.067±0.00 | 0.859±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | mediator complex subunit 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000577831  |
MED1-003 |
ENSG00000125686 |
9606 | - |
17:39407714-39451272  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008SN | CIL_0008SN_0001 | VISTA | 17:39110111-39710718 |
| CIL_0007D6 | CIL_0007D6_0001 | CGP | 17:39252644-39451286 |
| CIL_00080Z | CIL_00080Z_0001 | VISTA | 17:39318232-39918735 |
| CIL_00098W | CIL_00098W_0001 | VISTA | 17:39359510-39962707 |
| CIL_0007WH | CIL_0007WH_0001 | VISTA | 17:39374871-39978277 |
| CIL_0007D3 | CIL_0007D3_0001 | CGP | 17:39404285-39564907 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001104 | IEA | RNA polymerase II transcription cofactor activity |
| GO:0006357 | IEA | regulation of transcription from RNA polymerase II promoter |
| GO:0006366 | IEA | transcription from RNA polymerase II promoter |
| GO:0016592 | IEA | mediator complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000018304
|
Med1-002 | protein_coding | Mus_musculus | 0 | 5439 |
|
ENSMUST00000107545
|
Med1-001 | protein_coding | Mus_musculus | 0 | 5439 |
|
ENSMUST00000092735
|
Med1-004 | protein_coding | Mus_musculus | 0 | 1687 |
|
ENSMUST00000126483
|
Med1-006 | processed_transcript | Mus_musculus | 0 | 726 |
|
ENSMUST00000147933
|
Med1-007 | processed_transcript | Mus_musculus | 0 | 569 |
|
ENSMUST00000129557
|
Med1-003 | processed_transcript | Mus_musculus | 0 | 545 |
|
ENSMUST00000135479
|
Med1-005 | processed_transcript | Mus_musculus | 0 | 444 |
