C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUE domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000577840 CUEDC1-004 ENSG00000180891 9606 - 17:57863272-57955257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungMusclePlacentaENST00000577840
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Placenta
ENST00000577840 5.007±0.00 0.560±0.00 7.797±0.00 9.320±0.00 0.858±0.00 7.554±0.00 1.546±0.00 1.569±0.00 2.868±0.00 4.716±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PL CIL_0007PL_0001 UCNEbase 17:57406597-58005077
CIL_0009DM CIL_0009DM_0001 VISTA 17:57461902-58063720
CIL_0009DL CIL_0009DL_0001 VISTA 17:57574410-58175690
CIL_0004WX CIL_0004WX_0002 CGP 17:57861243-57988259

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184231 AL593853.2-201 protein_coding Mus_musculus 0 822
ENSMUST00000018522 Cuedc1-001 protein_coding Mus_musculus 0 822
ENSMUST00000154812 Cuedc1-002 nonsense_mediated_decay Mus_musculus 0 752
ENSMUST00000125297 Cuedc1-006 retained_intron Mus_musculus 0 261
ENSMUST00000142564 Cuedc1-004 processed_transcript Mus_musculus 0 261

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