C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUE domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018522 Cuedc1-001 ENSMUSG00000018378 10090 + 11:88099146-88194140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018522
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018522 12.853±0.73 19.311±3.41 17.121±2.16 11.003±2.27 7.440±3.10 14.455±1.15 8.551±1.98 5.083±1.17 0.440±0.13 13.739±0.57 42.207±5.55 10.813±3.60 2.832±0.79 0.411±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DL CIL_0009DL_0002 VISTA 11:87880548-88481652
CIL_0009DM CIL_0009DM_0002 VISTA 11:87974079-88576075
CIL_0007PL CIL_0007PL_0002 UCNEbase 11:88049942-88585488
CIL_00039R CIL_00039R_0002 CGP 11:88068279-88194140

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360238 CUEDC1-002 protein_coding Homo_sapiens 0 1230
ENST00000407144 CUEDC1-013 protein_coding Homo_sapiens 0 1230
ENST00000577589 CUEDC1-003 protein_coding Homo_sapiens 0 521
ENST00000577830 CUEDC1-001 protein_coding Homo_sapiens 0 1230
ENST00000577840 CUEDC1-004 protein_coding Homo_sapiens 0 822
ENST00000578357 CUEDC1-011 processed_transcript Homo_sapiens 0 403
ENST00000581391 CUEDC1-006 retained_intron Homo_sapiens 0 316
ENST00000584746 CUEDC1-012 retained_intron Homo_sapiens 0 327

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