C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | slingshot protein phosphatase 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000579040  |
SSH2-004 |
ENSG00000141298 |
9606 | - |
17:29673901-29930173  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009BZ | CIL_0009BZ_0001 | VISTA | 17:29367684-29969856 |
| CIL_000873 | CIL_000873_0001 | VISTA | 17:29367702-29969870 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000037912
|
Ssh2-001 | protein_coding | Mus_musculus | 0 | 989 |
|
ENSMUST00000180554
|
Ssh2-007 | retained_intron | Mus_musculus | 0 | 640 |
|
ENSMUST00000181283
|
Ssh2-002 | protein_coding | Mus_musculus | 0 | 619 |
|
ENSMUST00000127890
|
Ssh2-004 | processed_transcript | Mus_musculus | 0 | 433 |
|
ENSMUST00000156488
|
Ssh2-003 | protein_coding | Mus_musculus | 0 | 285 |
|
ENSMUST00000180545
|
Ssh2-006 | retained_intron | Mus_musculus | 2e-35 | 154 |
