C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: clathrin, heavy chain (Hc)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000579456 CLTC-010 ENSG00000141367 9606 + 17:59619932-59694114 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000579456
Transcript ID Ovary Placenta Testis
ENST00000579456 38.662±0.00 52.241±0.00 27.715±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081F CIL_00081F_0001 VISTA 17:59485788-60087415
CIL_0008Y2 CIL_0008Y2_0001 VISTA 17:59536739-60138754
CIL_0008VS CIL_0008VS_0001 VISTA 17:59556856-60159441
CIL_000568 CIL_000568_0002 CGP 17:59565525-59696956

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005488 IEA binding
GO:0006886 IEA intracellular protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030130 IEA clathrin coat of trans-Golgi network vesicle
GO:0030132 IEA clathrin coat of coated pit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060766 Cltc-006 protein_coding Mus_musculus 0 2440
ENSMUST00000103186 Cltc-001 protein_coding Mus_musculus 0 2440
ENSMUST00000124385 Cltc-002 protein_coding Mus_musculus 0 1114
ENSMUST00000134999 Cltc-003 processed_transcript Mus_musculus 0 322

Loading