C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: retinoic acid receptor, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000579727 RARA-010 ENSG00000131759 9606 + 17:40342399-40349818 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000579727
Transcript ID Muscle
ENST00000579727 4.579±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0001 VISTA 17:39768583-40372873
CIL_0002GL CIL_0002GL_0001 CGP 17:40287633-40357643
CIL_00050G CIL_00050G_0001 CGP 17:40309192-40363815

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107473 Rara-004 protein_coding Mus_musculus 0 374
ENSMUST00000164748 Rara-201 protein_coding Mus_musculus 0 257
ENSMUST00000068133 Rara-001 protein_coding Mus_musculus 0 257
ENSMUST00000107475 Rara-002 protein_coding Mus_musculus 0 257
ENSMUST00000107474 Rara-003 protein_coding Mus_musculus 0 257

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