C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000580104 TRAPPC8-003 ENSG00000153339 9606 - 18:31829938-31943136 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000580104
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000580104 1.138±0.00 2.893±0.24 2.809±1.11 2.190±1.18 1.331±0.38 1.250±0.00 1.386±0.70 2.902±2.21 1.356±0.55 1.502±1.09 1.497±0.54 5.396±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FN CIL_0002FN_0002 CGP 18:31829173-32073213

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025177 Trappc8-201 protein_coding Mus_musculus 0 3579
ENSMUST00000097658 Trappc8-202 protein_coding Mus_musculus 0 3112

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