C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUZ12 polycomb repressive complex 2 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000580398 SUZ12-002 ENSG00000178691 9606 + 17:31937067-32000649 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000580398
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000580398 1.312±0.00 0.422±0.00 0.275±0.00 1.440±0.00 1.616±0.00 0.464±0.19 1.353±0.00 0.324±0.00 4.618±2.78 7.233±0.00 13.766±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VR CIL_0000VR_0001 CGP 17:31860899-32001045

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163272 Suz12-201 protein_coding Mus_musculus 0 3443
ENSMUST00000017692 Suz12-001 protein_coding Mus_musculus 0 2560
ENSMUST00000120719 Gm14752-001 processed_pseudogene Mus_musculus 0 798
ENSMUST00000144188 Suz12-003 nonsense_mediated_decay Mus_musculus 0 673
ENSMUST00000148140 Suz12-004 retained_intron Mus_musculus 0 579
ENSMUST00000126091 Suz12-002 nonsense_mediated_decay Mus_musculus 0 560
ENSMUST00000132312 Suz12-005 retained_intron Mus_musculus 2e-40 172

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