C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of zeste 12 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017692 Suz12-001 ENSMUSG00000017548 10090 + 11:79993106-80034123 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017692
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017692 3.834±2.37 2.307±0.62 7.623±0.13 7.268±3.78 2.518±1.54 2.556±0.51 1.877±0.91 2.693±0.95 13.800±8.48 4.453±1.19 2.942±0.58 4.861±2.71 15.928±1.71 2.868±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VR CIL_0000VR_0002 CGP 11:79932321-80034123

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001739 IDA sex chromatin
GO:0003682 IDA chromatin binding
GO:0003723 IPI RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008284 IMP positive regulation of cell proliferation
GO:0016571 IMP histone methylation
GO:0016574 IMP histone ubiquitination
GO:0035064 IEA methylated histone binding
GO:0035098 IDA ESC/E(Z) complex
GO:0042054 IEA histone methyltransferase activity
GO:0043565 IDA sequence-specific DNA binding
GO:0045596 IEA negative regulation of cell differentiation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322652 SUZ12-001 protein_coding Homo_sapiens 0 3611
ENST00000497969 SUZ12P1-002 processed_transcript Homo_sapiens 0 488
ENST00000578070 SUZ12P1-005 processed_transcript Homo_sapiens 0 237
ENST00000578106 SUZ12-004 retained_intron Homo_sapiens 0 1219
ENST00000578195 SUZ12P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1271
ENST00000579526 SUZ12P1-004 processed_transcript Homo_sapiens 0 549
ENST00000580398 SUZ12-002 protein_coding Homo_sapiens 0 2560
ENST00000582329 SUZ12P1-006 processed_transcript Homo_sapiens 0 621
ENST00000582557 SUZ12P1-003 processed_transcript Homo_sapiens 0 974

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