C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuronal differentiation 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000580874 NEUROD2-002 ENSG00000171532 9606 - 17:39603536-39609777 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverPlacentaTestisENST00000580874
Transcript ID Adipose Adrenal Brain Breast Heart Liver Placenta Testis
ENST00000580874 0.011±0.00 0.019±0.00 0.149±0.00 0.020±0.00 0.012±0.00 0.011±0.00 0.011±0.00 0.021±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0001 VISTA 17:39110111-39710718
CIL_00080Z CIL_00080Z_0001 VISTA 17:39318232-39918735
CIL_00098W CIL_00098W_0001 VISTA 17:39359510-39962707
CIL_0007WH CIL_0007WH_0001 VISTA 17:39374871-39978277
CIL_0007D4 CIL_0007D4_0001 CGP 17:39461511-39609777
CIL_00061T CIL_00061T_0001 CGP 17:39603536-39636626

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041685 Neurod2-001 protein_coding Mus_musculus 0 1831

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