C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00061T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171532-ENSG00000131771 CGP 9606 17:39603536-39636626
GeneTranscriptPositionBiotype
ENSG00000131771 (PPP1R1B)
protein phosphatase 1, regulatory (inhibitor) subunit 1B 		ENST00000254079 (PPP1R1B-001) 39626924-39636626 protein_coding
ENST00000394265 (PPP1R1B-005) 39628498-39636625 protein_coding
ENST00000394267 (PPP1R1B-002) 39628498-39636626 protein_coding
ENST00000492037 (PPP1R1B-006) 39629405-39636624 retained_intron
ENST00000579000 (PPP1R1B-008) 39627200-39636622 protein_coding
ENST00000580029 (PPP1R1B-007) 39632138-39636625 retained_intron
ENST00000580772 (PPP1R1B-011) 39628526-39630452 retained_intron
ENST00000580825 (PPP1R1B-013) 39626740-39636000 protein_coding
ENST00000582680 (PPP1R1B-014) 39626952-39634084 protein_coding
ENST00000583446 (PPP1R1B-012) 39629374-39635721 retained_intron
ENSG00000171532 (NEUROD2)
neuronal differentiation 2 		ENST00000302584 (NEUROD2-001) 39604780-39607943 protein_coding
ENST00000580874 (NEUROD2-002) 39603536-39609777 retained_intron
ENSG00000214546 (AC087491.2)
 ENST00000398554 (AC087491.2-001) 39619613-39622513 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00061T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038255-ENSMUSG00000061718 CGP 10090 11:98325415-98357796
GeneTranscriptPositionBiotype
ENSMUSG00000038255 (Neurod2)
neurogenic differentiation 2 		ENSMUST00000041685 (Neurod2-001) 98325415-98329648 protein_coding
ENSMUSG00000061718 (Ppp1r1b)
protein phosphatase 1, regulatory (inhibitor) subunit 1B 		ENSMUST00000078694 (Ppp1r1b-001) 98348404-98357796 protein_coding
ENSMUST00000132443 (Ppp1r1b-005) 98350855-98357788 retained_intron
ENSMUST00000133700 (Ppp1r1b-007) 98351489-98357286 processed_transcript
ENSMUST00000137634 (Ppp1r1b-006) 98349996-98357794 protein_coding
ENSMUST00000147415 (Ppp1r1b-003) 98351215-98357391 retained_intron
ENSMUST00000150762 (Ppp1r1b-002) 98349996-98357794 protein_coding
ENSMUST00000152525 (Ppp1r1b-004) 98354596-98357103 processed_transcript
ENSMUSG00000085944 (1700003D09Rik)
RIKEN cDNA 1700003D09 gene 		ENSMUST00000141929 (1700003D09Rik-001) 98350718-98358283 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061T_0001ENSG00000131771ENST00000254079ENST00000394265ENST00000394267ENST00000492037ENST00000579000ENST00000580029ENST00000580772ENST00000580825ENST00000582680ENST00000583446ENSG00000171532ENST00000302584ENST00000580874ENSG00000214546ENST00000398554CIL_00061T_0002ENSMUSG00000038255ENSMUST00000041685ENSMUSG00000061718ENSMUST00000078694ENSMUST00000132443ENSMUST00000133700ENSMUST00000137634ENSMUST00000147415ENSMUST00000150762ENSMUST00000152525ENSMUSG00000085944ENSMUST00000141929
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061T_0001ENSG00000131771ENST00000254079ENST00000394265ENST00000394267ENST00000492037ENST00000579000ENST00000580029ENST00000580772ENST00000580825ENST00000582680ENST00000583446ENSG00000171532ENST00000302584ENST00000580874ENSG00000214546ENST00000398554CIL_00061T_0002ENSMUSG00000038255ENSMUST00000041685ENSMUSG00000061718ENSMUST00000078694ENSMUST00000132443ENSMUST00000137634ENSMUST00000147415ENSMUST00000152525ENSMUSG00000085944ENSMUST00000141929
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131771 ENST00000254079 11.305±0.00 N/A N/A 85.769±68.40 28.022±26.93 15.393±9.19 0.529±0.00 2.526±0.00 N/A 16.267±0.00 N/A 14.869±0.00 N/A 5.621±0.00
ENST00000394265 N/A N/A N/A N/A N/A N/A N/A 1.483±0.00 N/A N/A 0.303±0.00 1.417±0.55 0.150±0.00 3.868±0.00
ENST00000394267 N/A N/A N/A N/A N/A 6.043±0.00 N/A N/A N/A N/A N/A 0.688±0.26 N/A 0.957±0.00
ENST00000492037 N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A 0.614±0.00 N/A N/A
ENST00000579000 7.437±0.00 0.370±0.00 N/A N/A 0.998±0.00 18.855±0.00 0.108±0.00 2.975±0.00 0.311±0.00 2.853±2.09 N/A 2.701±0.00 N/A 5.180±4.10
ENST00000580029 N/A N/A N/A N/A 0.250±0.00 N/A 0.025±0.00 N/A 0.238±0.00 N/A N/A 0.303±0.00 N/A N/A
ENST00000580772 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.381±0.00 N/A N/A N/A N/A
ENST00000580825 N/A N/A 0.245±0.00 N/A N/A N/A N/A N/A 0.051±0.00 N/A 0.126±0.00 5.931±0.00 0.201±0.00 N/A
ENST00000582680 N/A N/A N/A N/A N/A N/A N/A N/A 2.976±0.00 N/A 0.438±0.00 N/A N/A 1.528±0.00
ENST00000583446 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.507±0.00 N/A N/A N/A N/A
ENSG00000171532 ENST00000302584 N/A N/A N/A 8.078±6.64 N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 0.122±0.00
ENST00000580874 0.011±0.00 0.019±0.00 N/A 0.149±0.00 0.020±0.00 N/A 0.012±0.00 N/A 0.011±0.00 N/A N/A N/A 0.011±0.00 0.021±0.01
ENSG00000214546 ENST00000398554 N/A N/A N/A 0.261±0.00 0.174±0.00 0.070±0.01 0.255±0.00 N/A N/A 0.126±0.00 N/A 0.075±0.00 0.062±0.00 0.153±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038255 ENSMUST00000041685 N/A N/A 0.004±0.00 27.239±10.80 N/A 0.016±0.01 N/A 0.010±0.00 0.013±0.02 0.008±0.00 N/A 0.014±0.00 0.004±0.00 0.009±0.00
ENSMUSG00000061718 ENSMUST00000078694 0.240±0.16 0.093±0.02 0.049±0.02 15.965±17.04 0.514±0.25 140.255±10.47 3.254±0.88 20.077±3.02 0.149±0.11 8.297±1.14 0.091±0.04 7.440±2.23 0.007±0.00 0.187±0.06
ENSMUST00000132443 0.230±0.18 N/A 0.013±0.00 9.755±9.30 N/A N/A 2.017±0.20 14.592±4.12 1.011±0.80 N/A 0.150±0.02 6.145±4.62 0.146±0.13 0.265±0.14
ENSMUST00000133700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137634 0.286±0.08 N/A N/A N/A 0.504±0.15 N/A N/A N/A N/A N/A 0.168±0.00 2.303±0.82 N/A N/A
ENSMUST00000147415 N/A 0.046±0.00 N/A 67.700±0.00 N/A N/A N/A N/A N/A N/A 0.075±0.00 2.961±0.00 0.009±0.00 N/A
ENSMUST00000150762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152525 N/A 0.214±0.00 N/A 74.462±0.00 N/A N/A N/A N/A N/A N/A N/A 7.025±0.00 0.019±0.00 1.205±0.00
ENSMUSG00000085944 ENSMUST00000141929 N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.01 0.222±0.04

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