C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: topoisomerase (DNA) II alpha 170kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581055 TOP2A-003 ENSG00000131747 9606 - 17:40413480-40417705 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000581055
Transcript ID Bladder
ENST00000581055 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HC CIL_0007HC_0001 CGP 17:40362931-40417950
CIL_0005R1 CIL_0005R1_0001 CGP 17:40388516-40457731

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0008301 IEA DNA binding, bending

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068031 Top2a-001 protein_coding Mus_musculus 0 614
ENSMUST00000129777 Top2a-003 processed_transcript Mus_musculus 0 339
ENSMUST00000139730 Top2a-002 processed_transcript Mus_musculus 0 281

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