C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rotatin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581161 RTTN-003 ENSG00000176225 9606 - 18:70003969-70205700 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000581161
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000581161 0.092±0.00 0.487±0.00 1.179±0.00 0.324±0.00 0.379±0.31 0.139±0.00 0.204±0.00 0.163±0.00 0.574±0.00 0.484±0.00 0.477±0.25 1.474±0.00 0.265±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AS CIL_0000AS_0002 CGP 18:69831158-70205945
CIL_000019 CIL_000019_0002 CGP 18:70003793-70330200

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023828 Rttn-201 protein_coding Mus_musculus 0 3589

Loading